# Raw sequencing and contact data (large binary; download separately)
data/raw/

# Processed graphs (large PyG objects; rebuilt from raw data)
data/processed/

# Package install artifacts
*.egg-info/
dist/
build/

# Python
__pycache__/
*.py[cod]
*.pyo
.pytest_cache/

# Environments
.env
*.env
.venv/

# Editors
.vscode/
.idea/
*.swp
*~

# Jupyter
.ipynb_checkpoints/
*.ipynb

# OS
.DS_Store
Thumbs.db

# Large bigWig signal files (download separately)
*.bw